| BondOrder() | ObjCryst::MolBond | |
| GetAtom1() const | ObjCryst::MolBond | |
| GetAtom1() | ObjCryst::MolBond | |
| GetAtom2() const | ObjCryst::MolBond | |
| GetAtom2() | ObjCryst::MolBond | |
| GetBondOrder() const | ObjCryst::MolBond | |
| GetDeriv(const std::map< const MolAtom *, XYZ > &m, const bool llk=false) const | ObjCryst::MolBond | |
| GetLength() const | ObjCryst::MolBond | |
| GetLength0() const | ObjCryst::MolBond | |
| GetLengthDelta() const | ObjCryst::MolBond | |
| GetLengthSigma() const | ObjCryst::MolBond | |
| GetLogLikelihood() const | ObjCryst::MolBond | [virtual] |
| GetLogLikelihood(const bool calcDeriv, const bool recalc) const | ObjCryst::MolBond | |
| GetMolecule() const | ObjCryst::MolBond | |
| GetMolecule() | ObjCryst::MolBond | |
| GetName() const | ObjCryst::MolBond | |
| GetType() const | ObjCryst::Restraint | [virtual] |
| IsFreeTorsion() const | ObjCryst::MolBond | |
| Length0() | ObjCryst::MolBond | |
| LengthDelta() | ObjCryst::MolBond | |
| LengthSigma() | ObjCryst::MolBond | |
| mAtomPair | ObjCryst::MolBond | [private] |
| mBondOrder | ObjCryst::MolBond | [private] |
| mDelta | ObjCryst::MolBond | [private] |
| mDerivAtom1 | ObjCryst::MolBond | [mutable, private] |
| mDerivAtom2 | ObjCryst::MolBond | [mutable, private] |
| mDerivLLKCoeff | ObjCryst::MolBond | [mutable, private] |
| mIsFreeTorsion | ObjCryst::MolBond | [private] |
| mLength0 | ObjCryst::MolBond | [private] |
| mLLK | ObjCryst::MolBond | [mutable, private] |
| MolBond(MolAtom &atom1, MolAtom &atom2, const REAL length, const REAL sigma, const REAL delta, Molecule &parent, const REAL bondOrder=1.) | ObjCryst::MolBond | |
| mpMol | ObjCryst::MolBond | [private] |
| mSigma | ObjCryst::MolBond | [private] |
| Restraint() | ObjCryst::Restraint | |
| Restraint(const RefParType *type) | ObjCryst::Restraint | |
| SetAtom1(MolAtom &at1) | ObjCryst::MolBond | |
| SetAtom2(MolAtom &at2) | ObjCryst::MolBond | |
| SetBondOrder(const REAL length) | ObjCryst::MolBond | |
| SetFreeTorsion(const bool isInRing) | ObjCryst::MolBond | |
| SetLength0(const REAL length) | ObjCryst::MolBond | |
| SetLengthDelta(const REAL length) | ObjCryst::MolBond | |
| SetLengthSigma(const REAL length) | ObjCryst::MolBond | |
| SetType(const RefParType *type) | ObjCryst::Restraint | [virtual] |
| XMLInput(istream &is, const XMLCrystTag &tag) | ObjCryst::MolBond | [virtual] |
| XMLOutput(ostream &os, int indent=0) const | ObjCryst::MolBond | [virtual] |
| ~MolBond() | ObjCryst::MolBond | [virtual] |
| ~Restraint() | ObjCryst::Restraint | [virtual] |
